rs2089222
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in complete genomics |
| Make rs2089222(A;A) |
| Make rs2089222(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 12 |
| Position | 116564853 |
| Gene | MAP1LC3B2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2089222 |
| dbSNP (classic) | rs2089222 |
| ClinGen | rs2089222 |
| ebi | rs2089222 |
| HLI | rs2089222 |
| Exac | rs2089222 |
| Gnomad | rs2089222 |
| Varsome | rs2089222 |
| LitVar | rs2089222 |
| Map | rs2089222 |
| PheGenI | rs2089222 |
| Biobank | rs2089222 |
| 1000 genomes | rs2089222 |
| hgdp | rs2089222 |
| ensembl | rs2089222 |
| geneview | rs2089222 |
| scholar | rs2089222 |
| rs2089222 | |
| pharmgkb | rs2089222 |
| gwascentral | rs2089222 |
| openSNP | rs2089222 |
| 23andMe | rs2089222 |
| SNPshot | rs2089222 |
| SNPdbe | rs2089222 |
| MSV3d | rs2089222 |
| GWAS Ctlg | rs2089222 |
| GMAF | 0.174 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 19684603 ]
|
| Trait | Acute lymphoblastic leukemia (childhood) |
| Title | Germline genomic variants associated with childhood acute lymphoblastic leukemia |
| Risk Allele | A |
| P-val | 8E-8 |
| Odds Ratio | 2.26 [1.60-3.0] |
