Rs1801282
From SNPedia
| is a | snp |
| is | mentioned by |
| dbSNP | rs1801282 |
| hapmap | rs1801282 |
| hgdp | rs1801282 |
| ensembl | rs1801282 |
| gopubmed | rs1801282 |
| scholar | rs1801282 |
| rs1801282 | |
| pharmgkb | rs1801282 |
| hgvbaseg2p | rs1801282 |
| medrefsnp | rs1801282 |
| 23andMe | rs1801282 |
| SNP Nexus |
| Gene | PPARG |
| Chromosome | 3 |
| Orientation | plus |
| Position | 12368125 |
| Genotype | Effect |
|---|---|
| rs1801282(C;C) | |
| rs1801282(C;G) | watch out for high fat in diet |
| rs1801282(G;G) | watch out for high fat in diet |
| Genotypes | Magnitude | Summary |
|---|---|---|
| Rs1801282(C;C) | 0.10.1 | |
| Rs1801282(C;G) | 33 | watch out for high fat in diet |
| Rs1801282(G;G) | 33 | watch out for high fat in diet |
rs1801282 has been reported to be associated with metabolic syndrome, but other studies have not been able to replicate any strong or significant effect. [PMID 18959602]
[PMID 17554300] The association between type-1 diabetes and SNP rs1801282 is mentioned as being replicated in
[PMID 18280041] rs1801282 and risk of cognitive decline in elders? Maybe with diabetes.
[PMID 19228871] A ten-year study of 679 male patients with symptomatic coronary artery disease found that rs1801282(G) carriers had a much lower (10 year) cardiovascular risk, with the hazard ratio estimated to be 0.10 (CI: 0.01-0.70, p = 0.02) for ischemic heart disease and 0.24 for vascular death (CI: 0.08-0.74, p = 0.013) per copy of the allele.
spittoon carriers could be informed that they really need to watch out for high fat in their diets
| ? | (C;C) (C;G) (G;G) |
|---|---|
|
| |
| Venter snp | |
|---|---|
| Source | plos |
| Gene | PPARG |
| allele | G |
| frequency | 0.075 |
| sift | |
| HuRef | 1103656026969 |
| Disease Association | Variation in PPARG is associated with carotid intimal medial thickness 1 (CIMT1) (MIM:609338). CIMT is a measure of atherosclerosis that is independently associated with traditional atherosclerotic cardiovascular disease risk factors and coronary atherosclerotic burden. 35 to 45% of the variability in multivariable-adjusted CIMT is explained by genetic factors. |
| Neighbor | rs17241090 |
| Distance | 1 |
| GWAS snp | |
|---|---|
| PMID | [PMID 17463246] |
| Trait | Type 2 diabetes |
| Title | Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels |
| Risk Allele | C |
| P-val | 0.0000019999999999999999 |
| Odds Ratio | 1.14 [1.08-1.20] |
| GWAS snp | |
|---|---|
| PMID | [PMID 17463248] |
| Trait | Type 2 diabetes |
| Title | A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants |
| Risk Allele | C |
| P-val | 0.0000019999999999999999 |
| Odds Ratio | 1.14 [1.08-1.20] |
| GWAS snp | |
|---|---|
| PMID | [PMID 17463249] |
| Trait | Type 2 diabetes |
| Title | Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes |
| Risk Allele | C |
| P-val | 0.0000019999999999999999 |
| Odds Ratio | 1.14 [1.08-1.20] |
[PMID 18972257] Comparison of genetic risk in three candidate genes (TCF7L2, PPARG, KCNJ11) with traditional risk factors for type 2 diabetes in a population-based study--the HUNT study
[PMID 18996470] Rapid and cost effective genotyping method for polymorphisms in PPARG, PPARGC1 and TCF7L2 genes
[PMID 19543210] PPARG Genotype Accounts for Part of Individual Variation in Body Weight Reduction in Response to Calorie Restriction
[PMID 19644638] No association between polymorphisms of proliferator-activated receptor-gamma gene and peak bone mineral density variation in Chinese nuclear families
[PMID 19720797] Impact of The PPAR-{gamma}2 Pro12Ala polymorphism and ACE inhibitor therapy on new-onset microalbuminuria in type 2 Diabetes: evidence from Benedict
[PMID 19733160] Gender specific effect of Pro12Ala polymorphism in Peroxisome Proliferator-Activated Receptorgamma-2 gene on obesity risk and leptin levels in a Tunisian population
[PMID 19745552] Pro12Ala Polymorphism of the Peroxisome ProliferatorActivated Receptor-gamma Gene is Associated With Metabolic Syndrome and Surrogate Measures of Insulin Resistance in Healthy Men
| PharmGKB | PA162191393 |
| Name | |
| Annotation | In a large Finnish case-control GWAS, rs1801282 was found to be associated with susceptibility to Type 2 Diabetes. |
| Gene | PPARG |
| Featue | Exon/NonSyn |
| Evidence | PubMed ID:17463248 |
| Drugs | |
| Diseases | Diabetes Mellitus, Type 2 |
| Curation Level | Curated |
[PMID 20043145] Improvements in glucose homeostasis in response to regular exercise are influenced by the PPARG Pro12Ala variant: results from the HERITAGE Family Study
[PMID 20179158] The Association Between the Peroxisome Proliferator-Activated Receptor-{gamma}2 (PPARG2) Pro12Ala Gene Variant and Type 2 Diabetes Mellitus: A HuGE Review and Meta-Analysis