Rs17266594

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is asnp
is mentioned by
dbSNPrs17266594
hapmaprs17266594
hgdprs17266594
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23andMers17266594
SNP Nexus

GeneBANK1
Chromosome4
Orientationplus
Position102969944
GenotypeEffect
rs17266594(C;C)*?
rs17266594(C;T)*?
rs17266594(T;T)*?


rs17266594 rs10516487 rs3733197 gene associated with systemic lupus erythematosus.[PMID 18204447]

The association between rs17266594 and lupus was replicated in a study of 1892 European-derived SLE patients and 2652 European-derived controls; the odds ratio observed was 1.22 (CI: 1.12-1.34, corrected p-value=1.97 x 10e-5).[PMID 19339986]

Neighborrs10516487
Distance154
? (C;C) (C;T) (T;T)


[PMID 19357697] Association of BANK1 and TNFSF4 with systemic lupus erythematosus in Hong Kong Chinese.

Related to B-CELL SCAFFOLD PROTEIN WITH ANKYRIN REPEATS 1; BANK1 according to omim 610292. See also


[PMID 19714582] Rheumatoid arthritis does not share most of the newly identified systemic lupus erythematosus genetic factors

[PMID 19815934] BANK1 functional variants are associated with susceptibility to diffuse systemic sclerosis in Caucasians

PharmGKBPA161925606
Name
AnnotationThis variant is in strong linkage disequilibrium with rs10516487, associated with systemic lupus erythematosus. The study showed that the BANK1 gene can be expressed in two isoforms, one full-length and the other alternatively spliced and lacking exon 2. The transcripts were differentially expressed depending on this SNP.
GeneBANK1
Featue
EvidencePubMed ID:18204447
Drugs
DiseasesLupus Erythematosus, Systemic
Curation LevelCurated