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Rs1464510

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Orientationminus
is asnp
is mentioned by
dbSNPrs1464510
PheGenIrs1464510
nextbiors1464510
hapmaprs1464510
1000 genomesrs1464510
hgdprs1464510
ensemblrs1464510
gopubmedrs1464510
geneviewrs1464510
scholarrs1464510
googlers1464510
pharmgkbrs1464510
gwascentralrs1464510
openSNPrs1464510
23andMers1464510
23andMe allrs1464510
SNP Nexus

SNPshotrs1464510
SNPdbers1464510
MSV3drs1464510
GeneLPP
Chromosome3
Orientationminus
GMAF0.4532
Position188394766
ReferenceGRCh38 38.1/141
Max Magnitude
Make rs1464510(G;G)
Make rs1464510(G;T)
Make rs1464510(T;T)
? (G;G) (G;T) (T;T) 28
GWAS
SNP rs1464510
PubMedID [PMID 18311140OA-icon.png]
Condition Celiac disease
Gene LPP
Risk Allele A
pValue 5.00E-009
OR 1.23
95% CI 1.15-1.32


OMIM612009
DescCELIAC DISEASE, SUSCEPTIBILITY TO, 11; CELIAC11
Variant
Relatedalso

[PMID 19693089] Four novel coeliac disease regions replicated in an association study of a Swedish-Norwegian family cohort


GWAS snp
PMID [PMID 20190752OA-icon.png]
Trait Celiac disease
Title Multiple common variants for celiac disease influencing immune gene expression
Risk Allele A
P-val 3E-40
Odds Ratio 1.29 [1.25-1.34]
GWAS snp
PMID [PMID 20410501OA-icon.png]
Trait Vitiligo
Title Variant of TYR and Autoimmunity Susceptibility Loci in Generalized Vitiligo
Risk Allele T
P-val 1E-11
Odds Ratio 1.31 [1.21-1.41]


[PMID 22087237OA-icon.png] Improving the estimation of celiac disease sibling risk by non-HLA genes

[PMID 18853133OA-icon.png] Gene variants influencing measures of inflammation or predisposing to autoimmune and inflammatory diseases are not associated with the risk of type 2 diabetes.

[PMID 19073967OA-icon.png] Shared and distinct genetic variants in type 1 diabetes and celiac disease.

[PMID 20647273OA-icon.png] Investigation of type 1 diabetes and coeliac disease susceptibility loci for association with juvenile idiopathic arthritis.


GET Evidence
rs1464510
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.335938
summary



[PMID 22922229OA-icon.png] Seven newly identified loci for autoimmune thyroid disease.