Rs11249433

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dbSNPrs11249433
hapmaprs11249433
hgdprs11249433
ensemblrs11249433
gopubmedrs11249433
scholarrs11249433
googlers11249433
pharmgkbrs11249433
hgvbaseg2prs11249433
medrefsnprs11249433
23andMers11249433
SNP Nexus

GeneLOC647121
Chromosome1
Orientationminus
Position121280613
ReferenceGRCh37 37.1/131
GenotypeEffect
rs11249433(C;C)*?
rs11249433(C;T)*?
rs11249433(T;T)*?


? (C;C) (C;T) (T;T) 28
NIH Although the function of this SNP is unknown, further analysis by the CGEMS team found that this region is predominately associated with estrogen receptor-positive breast cancer. From one person's DeCode report, it appears that the risk allele is C (relative risk 1.18 with two copies; apparently this information comes from a study or studies involving 9,335 cases and 10,263 controls).

[PMID 19330030] A multistage genome-wide association study in breast cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1).

PharmGKBPA164739885
Name
AnnotationGWAS results: A multistage genome-wide association study in Breast Cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1). (Initial Sample Size: 1,145 cases, 1,142 controls; Replication Sample Size: 8,625 cases, 9,657 controls); (Region: 1p11.2; Reported Gene(s): Intergenic; Risk Allele: rs11249433-C); (p-value= 0.0000000007).This variant is associated with Breast Cancer.
Gene-
Featue
EvidencePubMed ID:19330030; Web Resource:http://www.genome.gov/gwastudies/
Drugs
DiseasesBreast Neoplasms
Curation LevelNon-Curated

[PMID 20482849] NOTCH2 in breast cancer: association of SNP rs11249433 with gene expression in ER-positive breast tumors without TP53 mutations