Rs11190140

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Orientationplus
Make rs11190140(C;C)
Make rs11190140(C;T)
Make rs11190140(T;T)
ReferenceGRCh37 37.1/131
Chromosome10
Position101291593
GeneNKX2-3
is asnp
is mentioned by
dbSNPrs11190140
Exacrs11190140
PheGenIrs11190140
nextbiors11190140
hapmaprs11190140
1000 genomesrs11190140
hgdprs11190140
ensemblrs11190140
gopubmedrs11190140
geneviewrs11190140
scholarrs11190140
googlers11190140
pharmgkbrs11190140
gwascentralrs11190140
openSNPrs11190140
23andMers11190140
23andMe allrs11190140
SNP Nexus

SNPshotrs11190140
SNPdbers11190140
MSV3drs11190140
GMAF0.4486
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 18587394OA-icon.png]
Trait Crohn's disease
Title Genome-wide assocation defines more than 30 distinct susceptibility loci for Crohn's disease
Risk Allele T
P-val 2.9999999999999999E-16
Odds Ratio 1.20 [NR]
OMIM612288
DescINFLAMMATORY BOWEL DISEASE 20; IBD20
Variant
Relatedalso
GWAS snp
PMID [PMID 20228799OA-icon.png]
Trait Ulcerative colitis
Title Genome-wide association identifies multiple ulcerative colitis susceptibility loci
Risk Allele T
P-val 1E-8
Odds Ratio 1.20 [NR]


[PMID 20018022OA-icon.png] Replication of recently identified associated single-nucleotide polymorphisms from six autoimmune diseases in Genetic Analysis Workshop 16 rheumatoid arthritis data.


[PMID 21304977OA-icon.png] An investigation of genome-wide studies reported susceptibility loci for ulcerative colitis shows limited replication in north Indians.


GET Evidence
rs11190140
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.5625
summary