Rs10993994

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is asnp
is mentioned by
dbSNPrs10993994
hapmaprs10993994
hgdprs10993994
ensemblrs10993994
gopubmedrs10993994
scholarrs10993994
googlers10993994
pharmgkbrs10993994
hgvbaseg2prs10993994
medrefsnprs10993994
23andMers10993994
SNP Nexus

GeneMSMB
Chromosome10
Orientationplus
Position51219501
GenotypeEffect
rs10993994(C;C)*?
rs10993994(C;T)*?
rs10993994(T;T)*?


[PMID 19153072] rs10993994 linked to prostate cancer

cancer-genetics these snps influence genetic risk for prostate cancer

? (C;C) (C;T) (T;T)
GWAS
SNP rs10993994
PubMedID [PMID 18264096]
Condition Prostate cancer (aggressive)
Gene MSMB
Risk Allele T
pValue 7.00E-013
OR 1.16
95% CI 1.04-1.29


[PMID 19336566] Replication of the 10q11 and Xp11 Prostate Cancer Risk Variants: Results from a Utah Pedigree-Based Study.

[PMID 19366831] Analysis of Recently Identified Prostate Cancer Susceptibility Loci in a Population-based Study: Associations with Family History and Clinical Features

[PMID 19383797] Fine mapping and functional analysis of a common variant in MSMB on chromosome 10q11.2 associated with prostate cancer susceptibility

GWAS snp
PMID [PMID 18264097]
Trait Prostate cancer
Title Multiple newly identified loci associated with prostate cancer susceptibility
Risk Allele T
P-val 8.9999999999999996E-29
Odds Ratio 1.25 [1.17-1.34]
Related to PROSTATE CANCER, HEREDITARY, 13; HPC13 according to omim 611928. See also


Related to MICROSEMINOPROTEIN, BETA; MSMB according to omim 157145. See also


[PMID 19644707] Comprehensive resequence analysis of a 97 kb region of chromosome 10q11.2 containing the MSMB gene associated with prostate cancer

[PMID 19900942] Prognostic significance of prostate cancer susceptibility variants on prostate-specific antigen recurrence after radical prostatectomy

PharmGKBPA162356745
Name
AnnotationGWAS Results: Multiple newly identified loci associated with prostate cancer susceptibility (Initial Sample Size: 1,854 cases, 1,894 controls; Replication Sample Size: 3,268 cases, 3,366 controls; Risk Allele: rs10993994-T).
GeneMSMB
Featue
EvidencePubMed ID:18264097; Web Resource:http://www.genome.gov/gwastudies/
Drugs
DiseasesProstatic Neoplasms
Curation LevelNon-Curated