Rs10509540
From SNPedia
| Orientation | plus |
| is a | snp |
| is | mentioned by |
| dbSNP | rs10509540 |
| PheGenI | rs10509540 |
| nextbio | rs10509540 |
| hapmap | rs10509540 |
| 1000 genomes | rs10509540 |
| hgdp | rs10509540 |
| ensembl | rs10509540 |
| gopubmed | rs10509540 |
| geneview | rs10509540 |
| scholar | rs10509540 |
| rs10509540 | |
| pharmgkb | rs10509540 |
| gwascentral | rs10509540 |
| openSNP | rs10509540 |
| 23andMe | rs10509540 |
| 23andMe all | rs10509540 |
| SNP Nexus | |
| SNPshot | rs10509540 |
| SNPdbe | rs10509540 |
| MSV3d | rs10509540 |
| Chromosome | 10 |
| Orientation | plus |
| GMAF | 0.2358 |
| Position | 90023033 |
| Reference | GRCh37 37.1/131 |
| Max Magnitude |
| Make rs10509540(C;C) |
| Make rs10509540(C;T) |
| Make rs10509540(T;T) |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
| GWAS snp | |
|---|---|
| PMID | [PMID 19430480] |
| Trait | Type 1 diabetes |
| Title | Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes |
| Risk Allele | |
| P-val | 1E-28 |
| Odds Ratio | 1.33 [1.25-1.43] |
| GET Evidence | |
|---|---|
| rs10509540 | |
| aa_change | |
| aa_change_short | |
| impact | pathogenic |
| qualified_impact | Insufficiently evaluated pathogenic |
| overall_frequency | 0.210938 |
| summary | |
